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Low-Frequency Coding Variation Within GWAS Loci Illuminates New Genetic Contributors to Multiple Sclerosis: Evidence From Family Exomes and
Low-Frequency Coding Variation Within GWAS Loci Illuminates New Genetic Contributors to Multiple Sclerosis: Evidence From Family Exomes and

This blog post examines a study that integrates whole-exome sequencing in Italian multiple sclerosis families with targeted genotyping and resequencing in an unrelated patient cohort to prioritize low-frequency functional variants within previously implicated GWAS loci. The analysis highlights statistically enriched variants in C6orf10 and a 3′UTR variant in IL2RA, and extends to the discovery of additional rare mutations—including putative loss-of-function events—in the 3′ exon of C6orf10. By combining segregation-based filtering, population-frequency contrasts, and locus-focused follow-up, the study provides a structured approach to uncovering potentially causal coding changes that conventional GWAS may miss, while also underscoring the need for larger ancestry-matched replication and direct functional validation to establish mechanistic links to MS pathogenesis.

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